Selective Bibliography of Dr. Ding J. Jin
RNA Biology Laboratory, NCI

"Spatial Organization of the Transcription Machinery in Chromosome Territories During Growth and Stress Response"
Wednesday, April 26, 2017

1.  Jin DJ, Mata Martin C, Sun Z, Cagliero C, Zhou YN
Nucleolus-like compartmentalization of the transcription machinery in fast-growing bacterial cells
Critical Reviews in Biochemistry and Molecular Biology 52 (1):96-106 Feb 2017

2.  Kakar S, Fang X, Lubkowska L, Zhou YN, Shaw GX, Wang YX, Jin DJ, Kashlev M, Ji X
Allosteric Activation of Bacterial Swi2/Snf2 (Switch/Sucrose Non-fermentable) Protein RapA by RNA Polymerase: BIOCHEMICAL AND STRUCTURAL STUDIES
Journal of Biological Chemistry 290 (39):23656-69 Sep 25 2015

3.  Jin DJ, Cagliero C, Martin CM, Izard J, Zhou YN
The dynamic nature and territory of transcriptional machinery in the bacterial chromosome
Frontiers in Microbiology 6 497 2015

4.  Cagliero C, Zhou YN, Jin DJ
Spatial organization of transcription machinery and its segregation from the replisome in fast-growing bacterial cells
Nucleic Acids Research 42 (22):13696-705 Dec 16 2014

5.  Parks AR, Court C, Lubkowska L, Jin DJ, Kashlev M, Court DL
Bacteriophage lambda N protein inhibits transcription slippage by Escherichia coli RNA polymerase
Nucleic Acids Research 42 (9):5823-9 May 2014

6.  Jin DJ, Cagliero C, Zhou YN
Role of RNA polymerase and transcription in the organization of the bacterial nucleoid
Chemical Reviews 113 (11):8662-82 Nov 13 2013

7.  Cagliero C, Grand RS, Jones MB, Jin DJ, O'Sullivan JM
Genome conformation capture reveals that the Escherichia coli chromosome is organized by replication and transcription
Nucleic Acids Research 41 (12):6058-71 Jul 2013

8.  Zhou YN, Lubkowska L, Hui M, Court C, Chen S, Court DL, Strathern J, Jin DJ, Kashlev M
Isolation and characterization of RNA polymerase rpoB mutations that alter transcription slippage during elongation in Escherichia coli
Journal of Biological Chemistry 288 (4):2700-10 Jan 25 2013

9.  Strathern J, Malagon F, Irvin J, Gotte D, Shafer B, Kireeva M, Lubkowska L, Jin DJ, Kashlev M
The fidelity of transcription: RPB1 (RPO21) mutations that increase transcriptional slippage in S. cerevisiae
Journal of Biological Chemistry 288 (4):2689-99 Jan 25 2013

10.  Cagliero C, Jin DJ
Dissociation and re-association of RNA polymerase with DNA during osmotic stress response in Escherichia coli
Nucleic Acids Research 41 (1):315-26 Jan 07 2013