Selective Bibliography of Dr. Justin B. Lack
NIAID Collaborative Bioinformatics Resource, NIAID

"Bioinformatic support and genomic analysis of an international COVID-19 cohort"
Wednesday, May 19, 2021

1. Dudley JN, Hong CS, Hawari MA, Shwetar J, Sapp JC, Lack J, Shiferaw H, Johnston JJ, Biesecker LG
   Low-level variant calling for non-matched samples using a position-based and nucleotide-specific approach
   BMC Bioinformatics 22 (1):181 Apr 8 2021

2. Blazkova J, Huiting ED, Boddapati AK, Shi V, Whitehead EJ, Justement JS, Nordstrom J, Moir S, Lack J, Chun TWTIGIT expression on CD8+ T cells correlates with higher cytotoxic capacity
   The Journal of Infectious Diseases [Ahead of Print] Mar 21 2021

3. Dorrington MG, Bradfield CJ, Lack JB, Lin B, Liang JJ, Starr T, Ernst O, Gross JL, Sun J, Miller AH, Steele-Mortimer O, Fraser IDC
   Type I IFNs facilitate innate immune control of the opportunistic bacteria Burkholderia cenocepacia in the macrophage cytosol
   PLoS Pathogens 17 (3):e1009395 Mar 8 2021

4. Gardner CL, Pavel-Dinu M, Dobbs K, Bosticardo M, Reardon PK, Lack J, DeRavin SS, Le K, Bello E, Pala F, Delmonte OM, Malech H, Montel-Hagan A, Crooks G, Acuto O, Porteus MH, Notarangelo LD
   Gene Editing Rescues In vitro T Cell Development of RAG2-Deficient Induced Pluripotent Stem Cells in an Artificial Thymic Organoid System
   Journal of Clinical Immunology [Ahead of Print] Mar 1 2021

5. Nagarsheth NB, Norberg SM, Sinkoe AL, Adhikary S, Meyer TJ, Lack JB, Warner AC, Schweitzer C, Doran SL, Korrapati S, Stevanovic S, Trimble CL, Kanakry JA, Bagheri MH, Ferraro E, Astrow SH, Bot A, Faquin WC, Stroncek D, Gkitsas N, Highfill S, Hinrichs CS
   TCR-engineered T cells targeting E7 for patients with metastatic HPV-associated epithelial cancers
   Nature Medicine 27 (3):419-425 Mar 2021

6. Egan C, Lack J, Skarshaug S, Pham TA, Abdullaev Z, Xi L, Pack S, Pittaluga S, Jaffe ES, Raffeld M
   The mutational landscape of histiocytic sarcoma associated with lymphoid malignancy
   Modern Pathology: An Official Journal of the United States and Canadian Academy of Pathology, Inc 34 (2):336-347 Feb 2021

7. Dersh D, Phelan JD, Gumina ME, Wang B, Arbuckle JH, Holly J, Kishton RJ, Markowitz TE, Seedhom MO, Fridlyand N, Wright GW, Huang DW, Ceribelli M, Thomas CJ, Lack JB, Restifo NP, Kristie TM, Staudt LM, Yewdell JW
   Genome-wide Screens Identify Lineage- and Tumor-Specific Genes Modulating MHC-I- and MHC-II-Restricted Immunosurveillance of Human Lymphomas
   Immunity 54 (1):116-131.e10 Jan 12 2021

8. Sek AC, Percopo CM, Boddapati AK, Ma M, Geslewitz WE, Krumholz JO, Lack JB, Rosenberg HF
   Differential expression of Triggering Receptor Expressed on Myeloid cells 2 (Trem2) in tissue eosinophils
   Journal of Leukocyte Biology [Ahead of Print] Jan 6 2021

9. Migueles SA, Rogan DC, Gavil NV, Kelly EP, Toulmin SA, Wang LT, Lack J, Ward AJ, Pryal PF, Ludwig AK, Medina RG, Apple BJ, Toumanios CN, Poole AL, Rehm CA, Jones SE, Liang CJ, Connors M
   Antigenic Restimulation of Virus-Specific Memory CD8(+) T Cells Requires Days of Lytic Protein Accumulation for Maximal Cytotoxic Capacity
   Journal of Virology 94 (23):e01595-20 Nov 9 2020

10. Gara SK, Tyagi MV, Patel DT, Gaskins K, Lack J, Liu Y, Kebebew E
    GATA3 and APOBEC3B are prognostic markers in adrenocortical carcinoma and APOBEC3B is directly transcriptionally regulated by GATA3
    Oncotarget 11 (36):3354-3370 Sep 8 2020